STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KQM08457.1Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family. (404 aa)    
Predicted Functional Partners:
KQM08456.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.960
KQM08459.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.915
KQM08606.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.899
KQM08493.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.877
KQM08592.1
UDP-N-acetylglucosamine 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.828
KQM09313.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
 
 
 0.803
KQM09342.1
dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.803
KQM08458.1
FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.792
KQM08092.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.729
KQM08455.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.727
Your Current Organism:
Bacteroides periocalifornicus
NCBI taxonomy Id: 1702214
Other names: Bacteroides sp. 128, Bacteroidetes bacterium 12B, C. [Bacteroides] periocalifornicus, Candidatus Bacteroides periocalifornicus, Candidatus [Bacteroides] periocalifornicus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.