STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK53238.1protein-N-phosphohistidine-sugar phosphotransferase; 'Pfam: PTS system, Lactose/Cellobiose specific IIB subunit'. (205 aa)    
Predicted Functional Partners:
AMK53419.1
Hypothetical protein; 'Pfam: PTS system, Lactose/Cellobiose specific IIA subunit'.
  
 
 0.632
AMK53448.1
'Pfam: PTS system, Lactose/Cellobiose specific IIA subunit'.
  
 
 0.632
AMK53734.1
Hypothetical protein; 'Pfam: PTS system, Lactose/Cellobiose specific IIA subunit'.
  
 
 0.632
AMK54061.1
Hypothetical protein; 'Pfam: PTS system, Lactose/Cellobiose specific IIA subunit'.
  
 
 0.632
AMK54868.1
'Pfam: PTS system, Lactose/Cellobiose specific IIA subunit'.
  
 
 0.632
AMK55224.1
Hypothetical protein; 'Pfam: pfkB family carbohydrate kinase; TIGRFAM: 1-PFK: hexose kinase, 1-phosphofructokinase family; TIGRFAM: pfkB: 1-phosphofructokinase'; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.
  
  
 0.478
AMK53237.1
Hypothetical protein; 'Pfam: Helix-turn-helix domain, rpiR family; Pfam: SIS domain'.
       0.476
AMK55225.1
Hypothetical protein; 'Pfam: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2'.
  
    0.464
AMK53417.1
Hypothetical protein; 'Pfam: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; Pfam: HTH domain; Pfam: Mga helix-turn-helix domain; Pfam: PRD domain'.
  
  
 0.419
AMK55560.1
Hypothetical protein; 'Pfam: HTH domain; Pfam: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; Pfam: PRD domain'.
  
  
 0.419
Your Current Organism:
Faecalibaculum rodentium
NCBI taxonomy Id: 1702221
Other names: Allobaculum sp. Alo17, Erysipelotrichaceae bacterium Alo17, F. rodentium, Faecalibaculum rodentium Chang et al. 2016 emend. Cox et al. 2017, JCM 30274, KCTC 15484, strain ALO17
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.