STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK53458.1Hypothetical protein. (46 aa)    
Predicted Functional Partners:
galT
'Pfam: Galactose-1-phosphate uridyl transferase, N-terminal domain; Pfam: Galactose-1-phosphate uridyl transferase, C-terminal domain'.
       0.618
AMK53456.1
Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer.
       0.618
AMK53457.1
PRINTS: Galactokinase signature; PRINTS: Mevalonate kinase family signature; Pfam: GHMP kinases N terminal domain; Pfam: Galactokinase galactose-binding signature.
       0.618
AMK53459.1
Pfam: Protein of unknown function (DUF1211).
       0.618
Your Current Organism:
Faecalibaculum rodentium
NCBI taxonomy Id: 1702221
Other names: Allobaculum sp. Alo17, Erysipelotrichaceae bacterium Alo17, F. rodentium, Faecalibaculum rodentium Chang et al. 2016 emend. Cox et al. 2017, JCM 30274, KCTC 15484, strain ALO17
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.