STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asnAPfam: Aspartate-ammonia ligase; TIGRFAM: asnA: aspartate--ammonia ligase. (335 aa)    
Predicted Functional Partners:
AMK54433.1
TIGRFAM: asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing); Pfam: Glutamine amidotransferase domain; Pfam: Asparagine synthase.
   
 
 0.918
argG
TIGRFAM: argG: argininosuccinate synthase; Pfam: Arginosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
   
 
  0.904
AMK53291.1
'Pfam: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Pfam: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; PRINTS: Aspartate carbamoyltransferase signature; PRINTS: Aspartate/ornithine carbamoyltransferase superfamily signature; TIGRFAM: asp_carb_tr: aspartate carbamoyltransferase'; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
     
 0.903
purA
Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.
    
  0.903
AMK55563.1
PRINTS: Asparaginase/glutaminase family signature; Pfam: Asparaginase.
     
 0.900
AMK54888.1
Aspartate kinase; Pfam: ACT domain; TIGRFAM: asp_kinases: aspartate kinase; Pfam: Amino acid kinase family; Belongs to the aspartokinase family.
     
  0.800
AMK53660.1
Hypothetical protein.
       0.572
Your Current Organism:
Faecalibaculum rodentium
NCBI taxonomy Id: 1702221
Other names: Allobaculum sp. Alo17, Erysipelotrichaceae bacterium Alo17, F. rodentium, Faecalibaculum rodentium Chang et al. 2016 emend. Cox et al. 2017, JCM 30274, KCTC 15484, strain ALO17
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