STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpmAPhosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (249 aa)    
Predicted Functional Partners:
pgk
Pfam: Phosphoglycerate kinase; PRINTS: Phosphoglycerate kinase family signature; Belongs to the phosphoglycerate kinase family.
   
 0.972
eno
Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
  
 0.971
AMK55161.1
2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.
    
 0.943
AMK54448.1
Hypothetical protein; 'Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain'.
 
 
 0.942
pgi
Pfam: Phosphoglucose isomerase; PRINTS: Glucose-6-phosphate isomerase signature; Belongs to the GPI family.
  
 
 0.934
AMK53530.1
'Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain'.
  
 0.927
AMK53968.1
Fructose-1,6-bisphosphate aldolase, class II; 'TIGRFAM: cbbA: ketose-bisphosphate aldolase; Pfam: Fructose-bisphosphate aldolase class-II; TIGRFAM: fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II'.
   
 
 0.924
AMK53864.1
Hypothetical protein; 'Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Pfam: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain'.
  
 0.918
AMK55588.1
Hypothetical protein; Pfam: Glycerate kinase family; TIGRFAM: TIGR00045: glycerate kinase; Belongs to the glycerate kinase type-1 family.
     
 0.906
AMK53411.1
Pfam: Fructose-bisphosphate aldolase class-I.
  
 0.869
Your Current Organism:
Faecalibaculum rodentium
NCBI taxonomy Id: 1702221
Other names: Allobaculum sp. Alo17, Erysipelotrichaceae bacterium Alo17, F. rodentium, Faecalibaculum rodentium Chang et al. 2016 emend. Cox et al. 2017, JCM 30274, KCTC 15484, strain ALO17
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