STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMK54952.1'Pfam: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; SMART: Histidine kinase-like ATPases; Pfam: His Kinase A (phospho-acceptor) domain; SMART: His Kinase A (phosphoacceptor) domain'. (720 aa)    
Predicted Functional Partners:
AMK54951.1
Hypothetical protein; 'SMART: cheY-homologous receiver domain; Pfam: Transcriptional regulatory protein, C terminal; SMART: Transcriptional regulatory protein, C terminal; Pfam: Response regulator receiver domain'.
 
 
 0.972
AMK53405.1
Hypothetical protein; 'Pfam: Transcriptional regulatory protein, C terminal; SMART: cheY-homologous receiver domain; SMART: Transcriptional regulatory protein, C terminal; Pfam: Response regulator receiver domain'.
 
 
 0.830
AMK53697.1
Hypothetical protein; 'SMART: Transcriptional regulatory protein, C terminal; SMART: cheY-homologous receiver domain; Pfam: Transcriptional regulatory protein, C terminal; Pfam: Response regulator receiver domain'.
 
 
 0.808
AMK55032.1
Hypothetical protein; 'SMART: cheY-homologous receiver domain; Pfam: Response regulator receiver domain; SMART: Transcriptional regulatory protein, C terminal; Pfam: Transcriptional regulatory protein, C terminal'.
 
 
 0.801
AMK55271.1
Hypothetical protein; 'Pfam: Transcriptional regulatory protein, C terminal; SMART: Transcriptional regulatory protein, C terminal; SMART: cheY-homologous receiver domain; Pfam: Response regulator receiver domain'.
 
 
 0.798
AMK55873.1
Hypothetical protein; Pfam: Response regulator receiver domain; SMART: cheY-homologous receiver domain.
 
 
 0.774
AMK54950.1
Hypothetical protein.
       0.773
AMK54019.1
Two-component system, OmpR family, response regulator CssR; 'Pfam: Transcriptional regulatory protein, C terminal; Pfam: Response regulator receiver domain; SMART: Transcriptional regulatory protein, C terminal; SMART: cheY-homologous receiver domain'.
 
 
 0.765
AMK55821.1
Hypothetical protein; 'SMART: Transcriptional regulatory protein, C terminal; Pfam: Response regulator receiver domain; Pfam: Transcriptional regulatory protein, C terminal; SMART: cheY-homologous receiver domain'.
 
 
 0.753
AMK54930.1
Hypothetical protein; 'Pfam: Response regulator receiver domain; SMART: Transcriptional regulatory protein, C terminal; Pfam: Transcriptional regulatory protein, C terminal; SMART: cheY-homologous receiver domain'.
 
 
 0.739
Your Current Organism:
Faecalibaculum rodentium
NCBI taxonomy Id: 1702221
Other names: Allobaculum sp. Alo17, Erysipelotrichaceae bacterium Alo17, F. rodentium, Faecalibaculum rodentium Chang et al. 2016 emend. Cox et al. 2017, JCM 30274, KCTC 15484, strain ALO17
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.