STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_900155405_00824Unannotated protein. (108 aa)    
Predicted Functional Partners:
GCA_900155405_00823
Unannotated protein.
  
  
 0.971
GCA_900155405_00825
Unannotated protein.
  
  
 0.868
GCA_900155405_00822
Unannotated protein.
       0.752
GCA_900155405_00821
Unannotated protein.
       0.547
GCA_900155405_00654
Unannotated protein.
   
 
  0.531
GCA_900155405_00257
Unannotated protein.
  
 
  0.515
GCA_900155405_00023
Unannotated protein.
  
 
  0.484
GCA_900155405_00149
Unannotated protein.
    
  0.470
GCA_900155405_00969
Unannotated protein.
    
  0.470
GCA_900155405_00543
Unannotated protein.
    
  0.469
Your Current Organism:
Negativicoccus massiliensis
NCBI taxonomy Id: 1702287
Other names: CSUR P2082, DSM 100853, Marseille-P2082, N. massiliensis, Negativicoccus sp. AT7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.