STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP51747.1Putative dye-decolorizing peroxidase (DyP), encapsulated subgroup. (367 aa)    
Predicted Functional Partners:
lin
DyP-type peroxidase or ferritin-like protein oligomers encapsulating protein; Bacteriocin that has antimicrobial activity against a wide range of Gram-positive bacteria, including L.monocytogenes, B.cereus and S.aureus. May have a protease activity; Belongs to the peptidase U56 family.
   
 0.979
AOP51746.1
Hypothetical protein.
       0.564
AOP51749.1
5-amino-6-(5-phosphoribosylamino)uracil reductase-like.
       0.555
AOP53740.1
Putative transmembrane protein.
 
     0.491
AOP55289.1
Fumarate/succinate/L-aspartate dehydrogenase.
 
     0.491
AOP51745.1
Putative uroporphyrin-III c-methyltransferase.
       0.459
AOP51744.1
Hypothetical protein.
       0.448
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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