STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP51875.13-hydroxybutyryl-CoA dehydrogenase. (298 aa)    
Predicted Functional Partners:
AOP51874.1
Enoyl-CoA hydratase.
  
 0.992
AOP55302.1
Enoyl-CoA hydratase.
  
 0.959
AOP52983.1
Enoyl-CoA hydratase [valine degradation].
  
 0.950
AOP54887.1
Enoyl-CoA hydratase.
  
 0.945
AOP53115.1
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.937
AOP51873.1
3-ketoacyl-CoA thiolase / Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 0.926
AOP51876.1
Enoyl-CoA hydratase.
  
 0.898
AOP54853.1
Enoyl-CoA hydratase.
  
 0.831
AOP51872.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
  
 0.713
AOP51871.1
Phenylacetate-CoA oxygenase, PaaJ subunit.
  
    0.677
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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