STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP51879.1Membrane protein; FIG00761799. (267 aa)    
Predicted Functional Partners:
AOP53633.1
Mannose-6-phosphate isomerase.
 
     0.510
AOP55407.1
Trehalose-6-phosphate phosphatase.
   
   0.510
AOP53137.1
PF00070 family, FAD-dependent NAD(P)-disulfide oxidoreductase.
 
     0.495
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
   0.488
AOP54645.1
Thiosulfate sulfurtransferase, rhodanese.
 
    0.466
pyrR
Uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
 
     0.460
AOP53516.1
Chorismate mutase I.
     
 0.457
AOP51880.1
Hypothetical protein.
       0.444
AOP53325.1
Thiosulfate sulfurtransferase, rhodanese.
 
    0.442
AOP51953.1
Putative D-lactate dehydrogenase, Fe-S protein, FAD/FMN-containing.
   
 
 0.431
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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