STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP51908.1LysR family regulatory protein CidR; Belongs to the LysR transcriptional regulatory family. (313 aa)    
Predicted Functional Partners:
AOP52147.1
LysR family regulatory protein CidR.
  
     0.737
AOP55448.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.726
AOP51910.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
   
 0.700
AOP52049.1
Cys regulon transcriptional activator CysB; Belongs to the LysR transcriptional regulatory family.
  
     0.683
AOP51909.1
Phenylpropionate dioxygenase-related ring-hydroxylating dioxygenase, large terminal subunit.
 
     0.682
AOP54854.1
Transcriptional regulator lysR family.
  
     0.515
AOP53878.1
Glutamate synthase [NADPH] large chain.
     
 0.484
AOP51911.1
Putative Dimethylglycine oxidase; Belongs to the GcvT family.
 
     0.470
AOP51907.1
Threonine dehydrogenase-related Zn-dependent dehydrogenase.
       0.459
AOP51923.1
LysR family regulatory protein CidR.
  
     0.458
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.