STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP51909.1Phenylpropionate dioxygenase-related ring-hydroxylating dioxygenase, large terminal subunit. (429 aa)    
Predicted Functional Partners:
AOP51910.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 0.974
AOP55456.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
 0.902
AOP55453.1
2,4-dienoyl-CoA reductase [NADPH].
 
  
 0.858
AOP51911.1
Putative Dimethylglycine oxidase; Belongs to the GcvT family.
 
  
 0.834
AOP51844.1
Sarcosine oxidase alpha subunit.
 
  
 0.818
AOP51843.1
Sarcosine oxidase delta subunit.
 
    0.736
AOP51908.1
LysR family regulatory protein CidR; Belongs to the LysR transcriptional regulatory family.
 
     0.682
AOP51842.1
Sarcosine oxidase beta subunit.
 
     0.605
AOP51845.1
Sarcosine oxidase gamma subunit.
 
    0.596
AOP52113.1
Putative Dimethylglycine oxidase; Belongs to the GcvT family.
 
  
 0.575
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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