STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP51998.1Hypothetical protein. (285 aa)    
Predicted Functional Partners:
AOP51999.1
Mesaconyl-CoA C1-C4 CoA transferase; Belongs to the CoA-transferase III family.
    0.836
AOP51994.1
L-carnitine dehydratase/bile acid-inducible protein F.
    0.731
AOP52693.1
Hydroxymethylglutaryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.709
AOP54351.1
Citrate lyase beta chain; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.694
AOP51995.1
Fumarate hydratase class I.
       0.667
sucC
Succinyl-CoA ligase [ADP-forming] beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.
 
    0.547
AOP51997.1
isobutyryl-CoA dehydrogenase.
  
    0.546
AOP55265.1
Acyl-CoA dehydrogenase, long-chain specific, mitochondrial precursor.
 
    0.542
AOP51996.1
Butyryl-CoA dehydrogenase.
  
    0.526
AOP52745.1
2-methylcitrate dehydratase.
  
    0.517
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.