STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AOP52049.1Cys regulon transcriptional activator CysB; Belongs to the LysR transcriptional regulatory family. (312 aa)    
Predicted Functional Partners:
AOP52447.1
LysR family transcriptional regulator YnfL; Belongs to the LysR transcriptional regulatory family.
  
     0.770
AOP51849.1
Chromosome initiation inhibitor.
  
     0.740
AOP54167.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.739
AOP54689.1
Putative LysR-family transcriptional regulator.
  
     0.735
AOP55448.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.734
AOP51908.1
LysR family regulatory protein CidR; Belongs to the LysR transcriptional regulatory family.
  
     0.683
AOP54992.1
LysR-family transcriptional regulator.
  
     0.669
AOP54890.1
LysR family transcriptional regulator YeiE.
  
     0.642
AOP51923.1
LysR family regulatory protein CidR.
  
     0.596
lgt
Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.
       0.546
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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