STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52176.1Copper resistance protein CopC. (215 aa)    
Predicted Functional Partners:
AOP55374.1
Copper resistance protein CopD; Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein.
 
  
 0.795
AOP55348.1
Iron-dependent peroxidase.
 
    0.734
AOP52819.1
Putative Dyp-type peroxidase, associated with bacterial Cox17-like protein.
 
    0.724
AOP52175.1
Low molecular weight protein tyrosine phosphatase.
       0.661
AOP52818.1
Copper metallochaperone, bacterial Cox17-like protein.
  
    0.586
AOP55349.1
Copper metallochaperone, bacterial Cox17-like protein.
  
    0.586
AOP54686.1
Membrane protein, putative.
 
    0.479
AOP52174.1
Metallopeptidase.
       0.471
nadE
NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.
 
     0.461
AOP51971.1
Putative iron-regulated membrane protein; Iron-uptake factor PiuB.
  
    0.408
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.