STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52277.12-keto-4-pentenoate hydratase. (272 aa)    
Predicted Functional Partners:
AOP52523.1
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.780
AOP51954.1
2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.722
AOP52521.1
Homoprotocatechuate 2,3-dioxygenase.
 
   
 0.715
AOP52276.1
Bifunctional protein: zinc-containing alcohol dehydrogenase; Quinone oxidoreductase (NADPH:quinone reductase); Similar to arginate lyase.
       0.615
AOP52518.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
  
 0.541
AOP55396.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
 
   
 0.529
AOP51872.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
     
 0.431
AOP51910.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.431
AOP55456.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
     
 0.431
AOP52275.1
Conserved protein YyaK.
       0.406
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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