STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52342.1Aminomethyltransferase. (280 aa)    
Predicted Functional Partners:
lepA
Translation elongation factor LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.
      0.696
AOP52339.1
Tricarboxylate transport protein TctC.
       0.599
AOP52341.1
Tricarboxylate transport membrane protein TctA.
       0.598
AOP55180.1
N-carbamoylputrescine amidase.
 
   
 0.590
AOP52370.1
Choline-sulfatase.
 
     0.585
AOP52340.1
Tricarboxylate transport protein TctB.
       0.581
AOP51847.1
Ureidoglycolate dehydrogenase.
 
     0.572
AOP53019.1
Hypothetical protein.
 
     0.553
AOP51911.1
Putative Dimethylglycine oxidase; Belongs to the GcvT family.
 
     0.536
AOP54506.1
Allophanate hydrolase 2 subunit 2.
     
 0.535
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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