STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52357.1Tricarboxylate transport protein TctB. (225 aa)    
Predicted Functional Partners:
AOP52358.1
Tricarboxylate transport protein TctC.
 
  
 0.975
AOP52356.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.973
AOP51941.1
Putative tricarboxylic transport TctC.
 
  
 0.746
AOP53129.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.738
AOP52341.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.716
AOP51943.1
Tricarboxylate transport membrane protein TctA.
 
  
 0.712
AOP52339.1
Tricarboxylate transport protein TctC.
 
  
 0.692
AOP52462.1
Universal stress protein.
 
     0.647
AOP55159.1
Putative secreted protein.
 
     0.637
AOP52132.1
UspA domain protein.
 
     0.559
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.