STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52367.1Ethidium bromide-methyl viologen resistance protein EmrE. (104 aa)    
Predicted Functional Partners:
AOP52365.1
Transcriptional regulator, TetR family.
 
     0.894
AOP52366.1
Ethidium bromide-methyl viologen resistance protein EmrE.
 
    
0.870
AOP52364.1
Transcriptional regulator, TetR family.
       0.551
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.477
AOP52925.1
Putative integral membrane protein.
  
  
 0.439
AOP52363.1
Carboxylesterase NP.
       0.427
AOP52368.1
High-affinity choline uptake protein BetT; Belongs to the BCCT transporter (TC 2.A.15) family.
       0.424
AOP54720.1
Polysaccharide pyruvyl transferase.
  
    0.418
AOP52924.1
Glycosyl transferase, family 2.
  
  
 0.406
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.