STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52389.1Spermidine Putrescine ABC transporter permease component potC; TCDB _3.A.1.11.1. (287 aa)    
Predicted Functional Partners:
AOP52390.1
Spermidine Putrescine ABC transporter permease component PotB; TCDB 3.A.1.11.1.
 
 0.999
AOP52391.1
ABC transporter, periplasmic spermidine putrescine-binding protein PotD; TCDB 3.A.1.11.1.
 
 0.999
potA
Putrescine transport ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
 
 0.997
AOP52388.1
Nucleoside-diphosphate-sugar epimerase.
 
     0.788
AOP54654.1
Glycerol-3-phosphate ABC transporter, ATP-binding protein UgpC; TCDB 3.A.1.1.3; Belongs to the ABC transporter superfamily.
 
   
 0.706
AOP54972.1
Maltose/maltodextrin transport ATP-binding protein MalK.
 
   
 0.664
AOP53588.1
TCDB 3.A.1.8.1; TCDB 3.A.1.8.1; Molybdenum transport ATP-binding protein ModC.
  
  
 0.650
AOP52393.1
Exoenzymes regulatory protein AepA in lipid-linked oligosaccharide synthesis cluster.
       0.631
AOP52039.1
FAD dependent oxidoreductase.
 
     0.575
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
  
  
 0.518
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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