STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52399.1Permease of the drug/metabolite transporter (DMT) superfamily. (305 aa)    
Predicted Functional Partners:
AOP52398.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
       0.664
AOP52397.1
Hypothetical protein; FIG00447931.
       0.652
AOP52396.1
L-Asparaginase type 2-like superfamily protein.
       0.619
AOP53549.1
Methylated-DNA--protein-cysteine methyltransferase.
 
     0.531
purC
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
       0.485
pheT
Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
   
   0.444
AOP53278.1
Hydrolase, alpha/beta fold family functionally coupled to Phosphoribulokinase.
 
     0.427
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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