STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52406.1Hypothetical protein. (75 aa)    
Predicted Functional Partners:
AOP52407.1
Conserved hypothetical protein SCD25.26.
       0.701
rbpA
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.
  
     0.627
AOP52397.1
Hypothetical protein; FIG00447931.
 
     0.560
AOP54282.1
Protein often found in Actinomycetes clustered with signal peptidase and/or RNaseHII.
  
     0.552
crgA
Putative septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
  
     0.523
AOP54020.1
Hypothetical protein; FIG01121218.
  
     0.477
AOP54017.1
Hypothetical protein; FIG00448754.
  
     0.457
AOP52771.1
Hypothetical protein; Putative, related to broad specificity phosphatases COG0406.
  
     0.436
AOP54042.1
Putative membrane protein; FIG021764.
  
     0.430
AOP53493.1
Membrane alanine aminopeptidase N.
 
     0.428
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.