STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52460.1Mg/Co/Ni transporter MgtE; Acts as a magnesium transporter. (455 aa)    
Predicted Functional Partners:
AOP52461.1
Hypothetical protein.
       0.544
AOP52459.1
Hypothetical protein.
       0.539
AOP54795.1
Magnesium and cobalt transport protein CorA.
     
 0.497
AOP54627.1
Ribose ABC transport system, permease protein RbsC; TCDB 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
   
   0.443
AOP53945.1
Hypothetical protein.
   
   0.442
AOP54628.1
Ribose ABC transport system, permease protein RbsC; TCDB 3.A.1.2.1; Belongs to the binding-protein-dependent transport system permease family.
   
   0.439
AOP53575.1
Putative CONSERVED MEMBRANE PROTEIN.
     
 0.417
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.