STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52463.1Major myo-inositol transporter IolT; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family. (475 aa)    
Predicted Functional Partners:
AOP52462.1
Universal stress protein.
       0.787
AOP55352.1
N-acetylglucosamine-6-phosphate deacetylase.
 
  
 0.683
AOP52464.1
Transcriptional regulator, ArsR family.
       0.573
AOP52465.1
Putative carboxyvinyl-carboxyphosphonate phosphorylmutase.
       0.561
AOP53986.1
Omega-amino acid--pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.520
AOP54559.1
D-alanyl-D-alanine carboxypeptidase.
     
 0.447
rpmJ-2
LSU ribosomal protein L36p; Belongs to the bacterial ribosomal protein bL36 family.
  
    0.408
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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