STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52494.1Fic family protein. (407 aa)    
Predicted Functional Partners:
AOP52495.1
Macro domain protein; COG2110; possibly ADP-ribose binding module.
  
  
 0.797
AOP52497.1
Lactoylglutathione lyase.
       0.606
AOP52499.1
Sulfopyruvate decarboxylase - beta subunit.
       0.603
AOP52498.1
Sulfopyruvate decarboxylase - alpha subunit.
       0.601
AOP52496.1
Hypothetical protein.
       0.598
AOP52493.1
Hypothetical protein.
       0.552
AOP54922.1
Small hydrophobic protein.
  
     0.476
AOP52094.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
   
   0.469
AOP52069.1
Death on curing protein, Doc toxin.
 
   
 0.461
AOP53136.1
Hypothetical protein.
 
     0.460
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.