STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52495.1Macro domain protein; COG2110; possibly ADP-ribose binding module. (177 aa)    
Predicted Functional Partners:
AOP54146.1
ADP-ribosylglycohydrolase.
    
 0.925
AOP52494.1
Fic family protein.
  
  
 0.797
AOP52497.1
Lactoylglutathione lyase.
       0.634
AOP52499.1
Sulfopyruvate decarboxylase - beta subunit.
       0.625
AOP52496.1
Hypothetical protein.
       0.623
AOP52498.1
Sulfopyruvate decarboxylase - alpha subunit.
       0.618
AOP52615.1
NAD-dependent protein deacetylase of SIR2 family.
 
  
 0.618
AOP54459.1
Snf2 family protein.
   
  0.568
AOP52493.1
Hypothetical protein.
       0.540
AOP52500.1
Dihydrofolate reductase; COG0262.
  
    0.519
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.