STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52506.1Benzoate MFS transporter BenK. (412 aa)    
Predicted Functional Partners:
AOP52507.1
Uncharacterized protein Bsu YraM.
       0.854
AOP52505.1
Putative benzaldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
       0.624
AOP52488.1
3-carboxy-cis,cis-muconate cycloisomerase.
 
     0.509
AOP52490.1
Protocatechuate 3,4-dioxygenase beta chain.
 
     0.491
AOP52489.1
Protocatechuate 3,4-dioxygenase alpha chain.
 
     0.484
AOP55091.1
Permease of the major facilitator superfamily.
 
     0.410
AOP54074.1
Glucose/mannose:H+ symporter GlcP.
 
     0.409
AOP52491.1
P-hydroxybenzoate hydroxylase.
 
     0.406
AOP54826.1
Sugar transport protein.
  
     0.406
AOP52504.1
Transcriptional regulator, IclR family.
       0.405
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.