STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52507.1Uncharacterized protein Bsu YraM. (390 aa)    
Predicted Functional Partners:
AOP52506.1
Benzoate MFS transporter BenK.
       0.854
AOP52505.1
Putative benzaldehyde dehydrogenase oxidoreductase protein; Belongs to the aldehyde dehydrogenase family.
  
    0.642
AOP53125.1
Tricarboxylate transport protein TctC.
     0.622
AOP52034.1
S-adenosylmethionine:2-demethylmenaquinone methyltransferase.
 
   
 0.614
AOP52746.1
Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.
 
  
 0.587
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
 
 
   0.566
AOP54010.1
Aconitate hydratase - 2-methylisocitrate dehydratase; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
 
  
 0.540
AOP53158.1
Dicarboxylate carrier protein.
 
     0.510
AOP52722.1
N-acetylglutamate synthase; Belongs to the acetyltransferase family.
     
  0.499
AOP53157.1
Acetylornithine deacetylase.
     
  0.499
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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