STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52509.1Coenzyme F420-dependent oxidoreductase. (393 aa)    
Predicted Functional Partners:
AOP54810.1
Cytochrome P450; COG2124.
 
 
 0.598
AOP51810.1
LpqC.
 
     0.557
AOP52508.1
5'-nucleotidase.
       0.503
AOP52518.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
  
  
 0.498
AOP52521.1
Homoprotocatechuate 2,3-dioxygenase.
     
 0.469
AOP55197.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase.
     
 0.464
AOP53151.1
GTP cyclohydrolase II; 5-amino-6-(5-phosphoribosylamino)uracil reductase.
  
  
 0.459
AOP54185.1
Nucleoside-diphosphate-sugar epimerase.
 
   0.447
AOP51982.1
Alpha/beta hydrolase domain protein.
 
    0.421
AOP53890.1
Hypothetical protein; FIG00447567.
 
   0.416
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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