STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52511.1Transcriptional regulator, GntR family. (526 aa)    
Predicted Functional Partners:
AOP53299.1
Transmembrane component of energizing module of queuosine-regulated ECF transporter.
 
     0.735
AOP52354.1
Mobile element protein.
 
     0.718
AOP53639.1
Mobile element protein.
 
     0.718
AOP54870.1
Hypothetical protein.
 
     0.701
AOP53755.1
Hypothetical protein.
 
     0.697
AOP54768.1
Hypothetical protein.
 
     0.697
AOP55157.1
Hypothetical protein.
 
     0.697
AOP52510.1
Proline dehydrogenase (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase.
     
 0.692
AOP52512.1
Uridine kinase.
       0.532
AOP53298.1
Substrate-specific component of queuosine-regulated ECF transporter.
 
     0.510
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.