STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52521.1Homoprotocatechuate 2,3-dioxygenase. (370 aa)    
Predicted Functional Partners:
AOP52522.1
2-oxo-hepta-3-ene-1,7-dioic acid hydratase.
   
 0.989
AOP52518.1
5-carboxymethyl-2-hydroxymuconate delta-isomerase.
 
   
 0.969
AOP52519.1
Transcriptional regulator, GntR family.
 
   
 0.954
AOP52520.1
5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.949
AOP52523.1
Putative 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Belongs to the HpcH/HpaI aldolase family.
 
   
 0.945
AOP52516.1
Salicylate hydroxylase.
 
   
 0.907
AOP54884.1
Salicylate hydroxylase.
 
   
 0.829
AOP54589.1
TPP-requiring enzyme co-localized with fatty acid metabolic genes; Belongs to the TPP enzyme family.
 
  
 0.785
AOP52517.1
L-Proline/Glycine betaine transporter ProP.
 
   
 0.740
AOP52277.1
2-keto-4-pentenoate hydratase.
 
   
 0.724
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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