STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52542.1Allantoinase. (459 aa)    
Predicted Functional Partners:
pyrB
Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.
 
 0.981
carB
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
 
 
 0.962
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
 
  
 0.958
AOP52546.1
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
 
    0.933
AOP52549.1
Uricase (urate oxidase); Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
 0.878
AOP52547.1
2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) decarboxylase.
 
   
 0.848
AOP52553.1
Hypothetical protein; FIG01194264; Belongs to the HpcH/HpaI aldolase family.
 
     0.839
AOP52548.1
5-Hydroxyisourate Hydrolase (HIUase); Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
   
 0.836
AOP53180.1
Hydantoin racemase.
    
 0.797
AOP52064.1
Hypothetical protein; Believed to be an alternative form of N-formylglutamate deformylase, but experimentally invalidated.
 
 
  0.765
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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