STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52597.1Putative lipoprotein LprQ. (485 aa)    
Predicted Functional Partners:
AOP55537.1
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.683
AOP52527.1
Putative serine protease.
 
     0.651
AOP54997.1
Uncharacterized protein; Rv0487/MT0505 clustered with mycothiol biosynthesis gene.
 
     0.649
AOP54559.1
D-alanyl-D-alanine carboxypeptidase.
 
   
 0.641
AOP53610.1
Hypothetical protein; FIG00447856.
  
     0.636
AOP54386.1
Methionine synthase, vitamin-B12 independent, putative.
 
     0.611
AOP52654.1
Septum site-determining protein MinD.
 
     0.594
rpoZ
DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
    0.568
AOP54258.1
GCN5-related N-acetyltransferase; FIGfam019367.
 
     0.538
AOP52838.1
Hypothetical protein.
 
     0.531
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.