STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52614.1Multimeric flavodoxin WrbA. (146 aa)    
Predicted Functional Partners:
AOP52616.1
Hypothetical protein.
  
  
 0.623
AOP52615.1
NAD-dependent protein deacetylase of SIR2 family.
       0.603
AOP54319.1
Phospholipid-binding protein.
 
    0.575
AOP53970.1
Glutathione S-transferase, omega.
  
  
 0.525
AOP52612.1
Transcriptional regulator.
  
    0.522
AOP53151.1
GTP cyclohydrolase II; 5-amino-6-(5-phosphoribosylamino)uracil reductase.
   
 
 0.513
AOP55197.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; 5-amino-6-(5-phosphoribosylamino)uracil reductase.
   
   0.513
AOP52613.1
Hypothetical protein.
       0.503
AOP53227.1
Competence F-like protein, phosphoribosyltransferase domain; Protein YhgH required for utilization of DNA as sole source of carbon and energy.
 
    0.501
AOP53145.1
Non-specific DNA-binding protein Dps; Iron-binding ferritin-like antioxidant protein; Ferroxidase.
  
  
 0.482
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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