STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52642.1Zn-dependent hydrolase, including glyoxylase; FIG146518. (254 aa)    
Predicted Functional Partners:
AOP52641.1
Hypothetical protein; FIG00996530.
       0.854
AOP52640.1
Hypothetical protein; FIG137598.
  
    0.786
AOP55301.1
Hypothetical protein; FIG00996530.
     0.751
AOP52639.1
Hypothetical protein; FIG011121.
       0.688
AOP54450.1
Hypothetical protein.
  
 
 0.613
AOP53308.1
Sulfur carrier protein adenylyltransferase ThiF.
  
 
 0.585
AOP53580.1
Sulfur carrier protein adenylyltransferase ThiF.
  
 
 0.585
AOP53536.1
Ferredoxin reductase; At1g63940-like protein.
 
     0.489
guaA
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.466
AOP52149.1
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein); Belongs to the GcvP family.
  
    0.463
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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