STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52649.1ABC transporter, ATP-binding protein. (321 aa)    
Predicted Functional Partners:
AOP52648.1
ABC transporter, permease protein.
  
 0.941
AOP52650.1
Transcriptional regulator, TetR family.
 
     0.624
AOP53590.1
Glutamate transport ATP-binding protein gluA.
    
0.609
AOP55262.1
Putative ABC antibiotics transporter.
 
  
 0.546
AOP54438.1
ABC transporter (iron.B12.siderophore.hemin), ATP-binding component.
   
0.540
AOP55443.1
Putative ABC transporter permease protein.
  
 0.538
AOP53452.1
Methionine ABC transporter ATP-binding protein.
    
0.485
AOP52458.1
ABC bifunctional lipid A exporter.
 
 
  0.484
cysS
Cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.479
AOP52457.1
Putative ABC transporter ATPase component.
 
 
  0.463
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (28%) [HD]