STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52701.1Abortive infection protein. (253 aa)    
Predicted Functional Partners:
AOP52700.1
RND multidrug efflux transporter; Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
     0.734
AOP53608.1
Regulator of polyketide synthase expression.
 
     0.573
AOP52698.1
Protein YdjA; FIG002003.
  
    0.560
AOP52902.1
Hypothetical protein; Belongs to the UPF0336 family.
 
     0.538
AOP52702.1
Putative phosphatase.
       0.506
AOP52699.1
Permease of the major facilitator superfamily.
 
     0.494
AOP52754.1
Sugar phosphate isomerase/epimerase.
 
     0.479
AOP54755.1
Pyrroline-5-carboxylate reductase.
 
     0.460
AOP53888.1
Acetyl-coenzyme A carboxyl transferase beta chain.
  
    0.454
msrA
Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
       0.438
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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