STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52733.1LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (333 aa)    
Predicted Functional Partners:
AOP52734.1
Methyltransferase type 11.
       0.777
AOP55448.1
Putative LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.771
AOP52735.1
Putative methyltransferase.
       0.751
AOP54890.1
LysR family transcriptional regulator YeiE.
  
     0.745
AOP51923.1
LysR family regulatory protein CidR.
  
     0.687
AOP52731.1
Sarcosine oxidase beta subunit.
 
     0.597
AOP52736.1
Hypothetical protein.
       0.501
AOP53878.1
Glutamate synthase [NADPH] large chain.
     
 0.484
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.