STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52735.1Putative methyltransferase. (250 aa)    
Predicted Functional Partners:
AOP52733.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.751
AOP52734.1
Methyltransferase type 11.
       0.746
AOP52731.1
Sarcosine oxidase beta subunit.
   
   0.584
AOP54077.1
Non-ribosomal peptide synthetase, terminal component.
   
 
 0.578
AOP53761.1
Acetyltransferase, GNAT family.
 
     0.536
AOP52736.1
Hypothetical protein.
       0.512
AOP52753.1
GCN5-related N-acetyltransferase.
 
 
   0.483
AOP54951.1
N-acetylglucosamine-6-phosphate deacetylase.
 
     0.468
AOP52924.1
Glycosyl transferase, family 2.
     
 0.464
AOP54211.1
MFS general substrate transporter.
 
     0.454
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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