STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52736.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
AOP52734.1
Methyltransferase type 11.
 
    0.558
AOP52737.1
Hypothetical protein.
       0.541
AOP52735.1
Putative methyltransferase.
  
    0.509
AOP52733.1
LysR-family transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.491
AOP53323.1
Hypothetical protein.
 
     0.487
AOP51860.1
Alkyldihydroxyacetonephosphate synthase.
 
     0.462
AOP54981.1
Putative hydrolase in cluster with formaldehyde/S-nitrosomycothiol reductase MscR.
 
     0.407
AOP52487.1
Beta-ketoadipate enol-lactone hydrolase.
 
     0.403
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.