STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AOP52739.1Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine. (496 aa)    
Predicted Functional Partners:
AOP52738.1
ABC-type transporter, integral membrane subunit; Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine.
 
 0.997
AOP52740.1
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine.
 
  
 0.969
AOP53299.1
Transmembrane component of energizing module of queuosine-regulated ECF transporter.
 
 
 0.668
AOP55367.1
Hypothetical protein; FIG00447800.
 
     0.503
AOP54682.1
Transmembrane component BioN of energizing module of biotin ECF transporter.
  
 
 0.495
rpmF
LSU ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.
 
     0.490
AOP52579.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
  
 
 0.461
AOP53001.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
  
 
 0.461
AOP53065.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
  
 
 0.461
AOP53373.1
Oligopeptide transport system permease protein OppC; TCDB 3.A.1.5.1.
  
 
 0.461
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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