Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AOP52764.1 | AOP52767.1 | BLSMQ_1052 | BLSMQ_1055 | Hypothetical protein; FIG00447797. | Uroporphyrinogen-III synthase. | 0.821 |
AOP52764.1 | AOP52768.1 | BLSMQ_1052 | BLSMQ_1056 | Hypothetical protein; FIG00447797. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.796 |
AOP52764.1 | AOP52769.1 | BLSMQ_1052 | BLSMQ_1057 | Hypothetical protein; FIG00447797. | Transcriptional regulator, MarR family. | 0.699 |
AOP52764.1 | AOP52771.1 | BLSMQ_1052 | BLSMQ_1059 | Hypothetical protein; FIG00447797. | Hypothetical protein; Putative, related to broad specificity phosphatases COG0406. | 0.693 |
AOP52764.1 | AOP52772.1 | BLSMQ_1052 | BLSMQ_1060 | Hypothetical protein; FIG00447797. | Thiol:disulfide oxidoreductase related to ResA. | 0.749 |
AOP52764.1 | AOP52773.1 | BLSMQ_1052 | BLSMQ_1061 | Hypothetical protein; FIG00447797. | Cytochrome c-type biogenesis protein CcdA (DsbD-like protein). | 0.643 |
AOP52764.1 | AOP52774.1 | BLSMQ_1052 | BLSMQ_1062 | Hypothetical protein; FIG00447797. | Ccs1/ResB-related putative cytochrome C-type biogenesis protein. | 0.761 |
AOP52764.1 | hemA | BLSMQ_1052 | BLSMQ_1054 | Hypothetical protein; FIG00447797. | Porphobilinogen deaminase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA); Belongs to the HMBS family. | 0.796 |
AOP52764.1 | hemL | BLSMQ_1052 | BLSMQ_1058 | Hypothetical protein; FIG00447797. | Glutamate-1-semialdehyde aminotransferase. | 0.598 |
AOP52764.1 | rex | BLSMQ_1052 | BLSMQ_1053 | Hypothetical protein; FIG00447797. | Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein); Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. | 0.827 |
AOP52767.1 | AOP52764.1 | BLSMQ_1055 | BLSMQ_1052 | Uroporphyrinogen-III synthase. | Hypothetical protein; FIG00447797. | 0.821 |
AOP52767.1 | AOP52768.1 | BLSMQ_1055 | BLSMQ_1056 | Uroporphyrinogen-III synthase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.993 |
AOP52767.1 | AOP52769.1 | BLSMQ_1055 | BLSMQ_1057 | Uroporphyrinogen-III synthase. | Transcriptional regulator, MarR family. | 0.800 |
AOP52767.1 | AOP52771.1 | BLSMQ_1055 | BLSMQ_1059 | Uroporphyrinogen-III synthase. | Hypothetical protein; Putative, related to broad specificity phosphatases COG0406. | 0.786 |
AOP52767.1 | AOP52772.1 | BLSMQ_1055 | BLSMQ_1060 | Uroporphyrinogen-III synthase. | Thiol:disulfide oxidoreductase related to ResA. | 0.795 |
AOP52767.1 | AOP52773.1 | BLSMQ_1055 | BLSMQ_1061 | Uroporphyrinogen-III synthase. | Cytochrome c-type biogenesis protein CcdA (DsbD-like protein). | 0.804 |
AOP52767.1 | AOP52774.1 | BLSMQ_1055 | BLSMQ_1062 | Uroporphyrinogen-III synthase. | Ccs1/ResB-related putative cytochrome C-type biogenesis protein. | 0.822 |
AOP52767.1 | hemA | BLSMQ_1055 | BLSMQ_1054 | Uroporphyrinogen-III synthase. | Porphobilinogen deaminase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA); Belongs to the HMBS family. | 0.981 |
AOP52767.1 | hemL | BLSMQ_1055 | BLSMQ_1058 | Uroporphyrinogen-III synthase. | Glutamate-1-semialdehyde aminotransferase. | 0.948 |
AOP52767.1 | rex | BLSMQ_1055 | BLSMQ_1053 | Uroporphyrinogen-III synthase. | Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein); Modulates transcription in response to changes in cellular NADH/NAD(+) redox state. | 0.854 |
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