STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52783.1Putative secreted protein. (548 aa)    
Predicted Functional Partners:
AOP52782.1
Ribose 5-phosphate isomerase; COG0120.
       0.705
AOP52044.1
Alcohol dehydrogenase.
  
 
 0.627
AOP53496.1
Alcohol dehydrogenase.
  
 
 0.627
AOP54980.1
Formaldehyde dehydrogenase MscR, NAD/mycothiol-dependent; S-nitrosomycothiol reductase MscR.
  
 
 0.627
AOP52784.1
2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase.
       0.570
AOP55453.1
2,4-dienoyl-CoA reductase [NADPH].
  
  
 0.568
AOP52023.1
Permeases of the major facilitator superfamily; COG0477.
  
  
 0.557
AOP55397.1
Repressor CsoR of the copZA operon.
  
  
 0.557
AOP55491.1
Hypothetical protein; FIG00814300.
 
     0.471
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
 
     0.466
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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