STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52826.1Ribonucleotide reductase of class Ib (aerobic), beta subunit. (341 aa)    
Predicted Functional Partners:
AOP52827.1
Ribonucleotide reductase of class Ib (aerobic), alpha subunit.
 
 0.988
AOP52828.1
Ribonucleotide reduction protein NrdI.
 
 
 0.979
AOP54575.1
Ribonucleotide reductase of class Ib (aerobic), alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
 
 0.966
nrdI
Ribonucleotide reduction protein NrdI; Probably involved in ribonucleotide reductase function.
 
 
 0.938
AOP54577.1
Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib.
 
  
 0.904
AOP52825.1
FMN reductase, NADPH-dependent.
       0.767
AOP52829.1
Hypothetical protein.
       0.648
AOP54477.1
DNA polymerase III alpha subunit.
  
  
 0.546
AOP51872.1
Phenylacetate-CoA oxygenase/reductase, PaaK subunit.
  
  
 0.496
AOP51910.1
Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.
  
  
 0.496
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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