STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52898.1D-amino acid dehydrogenase small subunit. (378 aa)    
Predicted Functional Partners:
thiG
Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
  
 0.817
AOP52899.1
Major facilitator superfamily MFS_1.
       0.677
AOP51844.1
Sarcosine oxidase alpha subunit.
  
 
 0.612
AOP52113.1
Putative Dimethylglycine oxidase; Belongs to the GcvT family.
 
   0.573
AOP53310.1
Sulfur carrier protein ThiS.
  
  
 0.562
AOP52200.1
Ferredoxin reductase.
   
   0.556
AOP51911.1
Putative Dimethylglycine oxidase; Belongs to the GcvT family.
  
   0.518
AOP53308.1
Sulfur carrier protein adenylyltransferase ThiF.
  
  
 0.502
AOP53580.1
Sulfur carrier protein adenylyltransferase ThiF.
  
  
 0.502
AOP53878.1
Glutamate synthase [NADPH] large chain.
  
  
 0.485
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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