STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP52905.1Putative integral membrane protein. (558 aa)    
Predicted Functional Partners:
AOP53993.1
Hypothetical protein.
 
     0.766
AOP52902.1
Hypothetical protein; Belongs to the UPF0336 family.
       0.741
AOP52903.1
MaoC domain protein dehydratase.
       0.741
murB
UDP-N-acetylenolpyruvoylglucosamine reductase; Cell wall formation.
       0.741
AOP54405.1
Putative secreted protein.
  
     0.682
AOP55531.1
Hypothetical protein; FIG00448096.
  
     0.679
AOP52299.1
Peptidoglycan-binding domain 1 protein.
 
     0.666
AOP55048.1
Phosphate transport regulator.
 
     0.658
AOP53432.1
Hypothetical protein; FIG00448863.
 
     0.617
AOP53477.1
Cell division initiation protein DivIVA.
  
     0.603
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.