STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53077.1Putative NADPH QUINONE OXIDOREDUCTASE FADB4 (NADPH:QUINONE REDUCTASE) (ZETA-CRYSTALLIN). (323 aa)    
Predicted Functional Partners:
AOP55406.1
Acyl dehydratase.
   0.787
AOP52267.1
Acyl dehydratase.
   0.719
AOP53076.1
Putative phosphotransferase.
 
    0.677
AOP53074.1
Acyl-CoA dehydrogenase, short-chain specific.
 
    0.642
AOP55535.1
Thioredoxin reductase.
     0.628
AOP53078.1
Bifunctional protein: zinc-containing alcohol dehydrogenase; Quinone oxidoreductase (NADPH:quinone reductase); Similar to arginate lyase.
 
    
0.579
AOP53075.1
Short-chain dehydrogenase/reductase SDR.
       0.537
AOP51817.1
3-oxoacyl-[acyl-carrier-protein] synthase, KASII; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
      0.499
AOP54077.1
Non-ribosomal peptide synthetase, terminal component.
    
 0.467
AOP52682.1
Enoyl-CoA hydratase [isoleucine degradation]; 3-hydroxyacyl-CoA dehydrogenase; 3-hydroxybutyryl-CoA epimerase.
 
 
 0.464
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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