STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53188.1Acetyl-coenzyme A carboxyl transferase beta chain; Propionyl-CoA carboxylase beta chain. (526 aa)    
Predicted Functional Partners:
AOP53250.1
Biotin carboxyl carrier protein of acetyl-CoA carboxylase.
 
 0.970
AOP54507.1
Urea carboxylase without Allophanate hydrolase 2 domains.
 
 0.970
AOP52686.1
Methylcrotonyl-CoA carboxylase biotin-containing subunit.
 
 0.969
AOP53189.1
Biotin-protein ligase.
 
 
 0.857
AOP53187.1
Hypothetical protein.
       0.773
AOP53703.1
Pyruvate carboxyl transferase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
 
 0.773
AOP53888.1
Acetyl-coenzyme A carboxyl transferase beta chain.
  
 
0.746
AOP53190.1
Adenylate cyclase.
       0.715
AOP51939.1
Hydroxymethylglutaryl-CoA lyase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
 0.624
AOP51995.1
Fumarate hydratase class I.
  
  
 0.618
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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