STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53207.1Hypothetical protein. (244 aa)    
Predicted Functional Partners:
AOP53206.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
  
    0.798
AOP53204.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
  
  
 0.719
AOP53205.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
  
    0.713
AOP53208.1
Coenzyme F420-0:L-glutamate ligase - Coenzyme F420-1:L-glutamate ligase.
       0.645
AOP51995.1
Fumarate hydratase class I.
  
  
 0.550
AOP53982.1
Transcriptional regulator.
   
   0.538
AOP53448.1
Putative transcriptional regulator.
   
 
 0.496
AOP55003.1
Putative DNA-binding protein in cluster with Type I restriction-modification system.
   
 
 0.496
AOP52510.1
Proline dehydrogenase (Proline oxidase); Delta-1-pyrroline-5-carboxylate dehydrogenase.
  
  
 0.495
AOP54477.1
DNA polymerase III alpha subunit.
  
  
 0.480
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.