STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AOP53208.1Coenzyme F420-0:L-glutamate ligase - Coenzyme F420-1:L-glutamate ligase. (412 aa)    
Predicted Functional Partners:
AOP53206.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
       0.654
AOP53207.1
Hypothetical protein.
       0.645
AOP53204.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B.
       0.586
AOP53205.1
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A.
       0.585
AOP53860.1
LPPGFO 2-phospho-L-lactate transferase like protein, CofD-like; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.
  
  
 0.583
whiB
Sporulation regulatory protein WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
       0.561
AOP53210.1
Glycosyl transferase, family 2.
       0.561
AOP55088.1
Quinate/shikimate 5-dehydrogenase I delta.
 
    0.449
AOP53413.1
NTP pyrophosphohydrolase including oxidative damage repair enzymes; FIG067024.
      0.402
Your Current Organism:
Brevibacterium linens
NCBI taxonomy Id: 1703
Other names: ATCC 9172, B. linens, Bacterium linens, Brevibacterium sp. RS16(2010), CIP 101125, Corynebacterium sp. AC474, DSM 20425, HAMBI 2038, IFO 12142, NBRC 12142, NRRL B-4210, VKM Ac-2112
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